Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800528.1_cds_XP_016470122.1_6210
CDS Infomation

[gene=LOC107792419] [db_xref=GeneID:107792419] [protein=laccase-11-like] [protein_id=XP_016470122.1] [location=join(23282..23389,23516..23667,23765..24009,24132..24260,24370..25293,25381..25511)] [gbkey=CDS]
Sequence

ATGGCAAAGCAGACAAGTTTCTTTCCACTGCTAGGCTTCCTTGTCATTGGATTTCTTTGT
TTCATTTGTCTACCTGCTGAGGCTGCCCTTAAGAAATATCAGTTTGATGTTCAAGTGGCA
AATGTGAGCAGATTGTGCCATGCAAAACCAATTGTTACAGTTAATGGGAGATTTCCCGGG
CCAACTATATATGCTAGAGAAGGAGATAGAGTTCAAATAAATGTTACTAACTTTGCACAG
TATAACTTGTCCATCCACTGGCATGGATTGAAACAATATCGCAATGGTTGGGCAGACGGG
CCAGCTTACATAACTCAGTGCCCTATTCAGACAGGAAATAGCTATGTTTATGACTTCAAT
ATAACAGGACAAAGAGGAACCTTATGGTGGCATGCACACATTCTTTGGCTAAGAGCAACA
GTCTATGGTGCTATAGTGATCATGCCACAACAAGGAACTCCCTTCCCTTTCCCTCAGCCA
GATAGGGAAGAAGTACTTGTACTAGGAGAATGGTGGGATGCTGATGTAGAAGAAGTAGAG
AAACAAGGAAACGCATTGGGTATTCCACCTAATATGTCTGATGCTCACACAATCAACGGA
AAGCCAGGGCCTCTTTTTCCATGTTCTGAGAAACATACTTTTGCCATGGAAGTGAAAAAA
GGGAAGACATACCTGTTGAGAATTGTCAACGCTGCTCTCAATGATGAGCTGTTTTTTGCC
CTGGCTAATCATACTTTCACAGTAGTAGAAATTGATGCAGTTTACACGAAACCATTCAGC
ACAGAGGCCATTCTGATTGCACCAGGGCAGACTACAAACGTTCTGGTTCGTGCCAACCAA
GTTCCAGGAAGATACTTCATGGCTGCAAGGGCATTCATGGATGCTCCAATCTCTGTGGAT
AACAAGACTGCTACTGCTATATTCCAGTACAAGGGAATCCCAGAAAGTGTACTTCCAAAA
CTTCCAAGCTTGCCAGCACAAAATGACACAGACTTTGCTTTGACCTATAACTCTAAACTC
AAAAGCCTAAATACCCCTAAATATCCAGCAAACGTTCCCCTAAATGTTGATCGACACCTC
TTGTTTACAGTAGGCCTAGGAATAAATCCTTGTCCCACCTGTCTAAATGGAACTCGGCTA
ACGGCTTCTCTCAACAACATTACCTTTAGCATGCCACAAACTGCACTTCTTCAAGCTCAT
TACTTCAACATTAAGGGTGTATACACTCCAGATTTCCCAGACAAACCACCTACTCAATTC
AATTTTACAGGGGCACCTCTTACAGCCAACCTAAGGACAAATCTAGGCACAAGGCTTAAT
AAGATTGCTTTCAATTCCACTATCGAACTAGTTATCCAAGACACCAACTTGTTATCGGTG
GAATCACATCCTTTCCATCTCCATGGCTACAATTTCTTTGTGGTTGGAACTGGTGTCGGA
AACTTTGACCCCAAAAAGGATCCAGCAAAATACAACTTGATTGATCCAATAGAAAGAAAT
ACTGTAGGTGTTCCAACTGGCGGTTGGACTGCTATTCGATTCAGAGCTGATAATCCAGGG
GTCTGGTTTTTTCACTGTCATCTGGAGTTGCACACAGGATGGGGACTGAAAACAGCATTT
TTAGTGGAAGATGGGCCAGGATCAGATCACAATATTCTTCCTCCACCAAAGGATCTTCCA
CACTGCTAA

Peptide Sequence

PEP ID

XP_016470122.1
PEP Infomation

PREDICTED: laccase-11-like [Nicotiana tabacum]
Sequence

MAKQTSFFPLLGFLVIGFLCFICLPAEAALKKYQFDVQVANVSRLCHAKPIVTVNGRFPG
PTIYAREGDRVQINVTNFAQYNLSIHWHGLKQYRNGWADGPAYITQCPIQTGNSYVYDFN
ITGQRGTLWWHAHILWLRATVYGAIVIMPQQGTPFPFPQPDREEVLVLGEWWDADVEEVE
KQGNALGIPPNMSDAHTINGKPGPLFPCSEKHTFAMEVKKGKTYLLRIVNAALNDELFFA
LANHTFTVVEIDAVYTKPFSTEAILIAPGQTTNVLVRANQVPGRYFMAARAFMDAPISVD
NKTATAIFQYKGIPESVLPKLPSLPAQNDTDFALTYNSKLKSLNTPKYPANVPLNVDRHL
LFTVGLGINPCPTCLNGTRLTASLNNITFSMPQTALLQAHYFNIKGVYTPDFPDKPPTQF
NFTGAPLTANLRTNLGTRLNKIAFNSTIELVIQDTNLLSVESHPFHLHGYNFFVVGTGVG
NFDPKKDPAKYNLIDPIERNTVGVPTGGWTAIRFRADNPGVWFFHCHLELHTGWGLKTAF
LVEDGPGSDHNILPPPKDLPHC

Transcript Sequence

Gene sequence data has not been registered.